Source Code Cross Referenced for DiffMyers.java in  » Testing » KeY » de » uka » ilkd » key » proof » Java Source Code / Java DocumentationJava Source Code and Java Documentation

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Java Source Code / Java Documentation » Testing » KeY » de.uka.ilkd.key.proof 
Source Cross Referenced  Class Diagram Java Document (Java Doc) 


001:        // This file is part of KeY - Integrated Deductive Software Design
002:        // Copyright (C) 2001-2007 Universitaet Karlsruhe, Germany
003:        //                         Universitaet Koblenz-Landau, Germany
004:        //                         Chalmers University of Technology, Sweden
005:        //
006:        // The KeY system is protected by the GNU General Public License. 
007:        // See LICENSE.TXT for details.
008:        //
009:
010:        package de.uka.ilkd.key.proof;
011:
012:        import java.util.Hashtable;
013:        import java.util.Vector;
014:
015:        import de.uka.ilkd.key.logic.IntIterator;
016:        import de.uka.ilkd.key.logic.PosInTerm;
017:
018:        /** A class to compare vectors of objects.  The result of comparison
019:         is a list of <code>change</code> objects which form an
020:         edit script.  The objects compared are traditionally lines
021:         of text from two files.  Comparison options such as "ignore
022:         whitespace" are implemented by modifying the <code>equals</code>
023:         and <code>hashcode</code> methods for the objects compared.
024:         <p>
025:         The basic algorithm is described in: </br>
026:         "An O(ND) Difference Algorithm and its Variations", Eugene Myers,
027:         Algorithmica Vol. 1 No. 2, 1986, p 251.  
028:         <p>
029:         This class outputs different results from GNU diff 1.15 on some
030:         inputs.  Our results are actually better (smaller change list, smaller
031:         total size of changes), but it would be nice to know why.  Perhaps
032:         there is a memory overwrite bug in GNU diff 1.15.
033:
034:         @author Stuart D. Gathman, translated from GNU diff 1.15
035:         Copyright (C) 2000  Business Management Systems, Inc.
036:         <p>
037:         This program is free software; you can redistribute it and/or modify
038:         it under the terms of the GNU General Public License as published by
039:         the Free Software Foundation; either version 1, or (at your option)
040:         any later version.
041:         <p>
042:         This program is distributed in the hope that it will be useful,
043:         but WITHOUT ANY WARRANTY; without even the implied warranty of
044:         MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
045:         GNU General Public License for more details.
046:         <p>
047:         You should have received a copy of the <a href=COPYING.txt>
048:         GNU General Public License</a>
049:         along with this program; if not, write to the Free Software
050:         Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
051:
052:         */
053:
054:        public class DiffMyers {
055:
056:            /** Prepare to find differences between two arrays.  Each element of
057:                the arrays is translated to an "equivalence number" based on
058:                the result of <code>equals</code>.  The original Object arrays
059:                are no longer needed for computing the differences.  They will
060:                be needed again later to print the results of the comparison as
061:                an edit script, if desired.
062:             */
063:            public DiffMyers(PosInTerm a, PosInTerm b) {
064:                Hashtable h = new Hashtable(a.depth() + b.depth());
065:                filevec[0] = new file_data(a, h);
066:                filevec[1] = new file_data(b, h);
067:            }
068:
069:            public DiffMyers(Vector a, Vector b) {
070:                Hashtable h = new Hashtable(a.size() + b.size());
071:                filevec[0] = new file_data(a, h);
072:                filevec[1] = new file_data(b, h);
073:            }
074:
075:            /** 1 more than the maximum equivalence value used for this or its
076:               sibling file. */
077:            private int equiv_max = 1;
078:
079:            /** When set to true, the comparison uses a heuristic to speed it up.
080:              With this heuristic, for files with a constant small density
081:              of changes, the algorithm is linear in the file size.  */
082:            public boolean heuristic = false;
083:
084:            /** When set to true, the algorithm returns a guarranteed minimal
085:                set of changes.  This makes things slower, sometimes much slower. */
086:            public boolean no_discards = true;
087:
088:            private int[] xvec, yvec; /* Vectors being compared. */
089:            private int[] fdiag; /* Vector, indexed by diagonal, containing
090:                               the X coordinate of the point furthest
091:                               along the given diagonal in the forward
092:                               search of the edit matrix. */
093:            private int[] bdiag; /* Vector, indexed by diagonal, containing
094:                               the X coordinate of the point furthest
095:                               along the given diagonal in the backward
096:                               search of the edit matrix. */
097:            private int fdiagoff, bdiagoff;
098:            private final file_data[] filevec = new file_data[2];
099:            private int cost;
100:
101:            /** Find the midpoint of the shortest edit script for a specified
102:               portion of the two files.
103:
104:               We scan from the beginnings of the files, and simultaneously from the ends,
105:               doing a breadth-first search through the space of edit-sequence.
106:               When the two searches meet, we have found the midpoint of the shortest
107:               edit sequence.
108:
109:               The value returned is the number of the diagonal on which the midpoint lies.
110:               The diagonal number equals the number of inserted lines minus the number
111:               of deleted lines (counting only lines before the midpoint).
112:               The edit cost is stored into COST; this is the total number of
113:               lines inserted or deleted (counting only lines before the midpoint).
114:
115:               This function assumes that the first lines of the specified portions
116:               of the two files do not match, and likewise that the last lines do not
117:               match.  The caller must trim matching lines from the beginning and end
118:               of the portions it is going to specify.
119:
120:               Note that if we return the "wrong" diagonal value, or if
121:               the value of bdiag at that diagonal is "wrong",
122:               the worst this can do is cause suboptimal diff output.
123:               It cannot cause incorrect diff output.  */
124:
125:            private int diag(int xoff, int xlim, int yoff, int ylim) {
126:                final int[] fd = fdiag; // Give the compiler a chance.
127:                final int[] bd = bdiag; // Additional help for the compiler.
128:                final int[] xv = xvec; // Still more help for the compiler.
129:                final int[] yv = yvec; // And more and more . . .
130:                final int dmin = xoff - ylim; // Minimum valid diagonal.
131:                final int dmax = xlim - yoff; // Maximum valid diagonal.
132:                final int fmid = xoff - yoff; // Center diagonal of top-down search.
133:                final int bmid = xlim - ylim; // Center diagonal of bottom-up search.
134:                int fmin = fmid, fmax = fmid; // Limits of top-down search.
135:                int bmin = bmid, bmax = bmid; // Limits of bottom-up search.
136:                /* True if southeast corner is on an odd
137:                                                 diagonal with respect to the northwest. */
138:                final boolean odd = (fmid - bmid & 1) != 0;
139:
140:                fd[fdiagoff + fmid] = xoff;
141:                bd[bdiagoff + bmid] = xlim;
142:
143:                for (int c = 1;; ++c) {
144:                    int d; /* Active diagonal. */
145:                    boolean big_snake = false;
146:
147:                    /* Extend the top-down search by an edit step in each diagonal. */
148:                    if (fmin > dmin)
149:                        fd[fdiagoff + --fmin - 1] = -1;
150:                    else
151:                        ++fmin;
152:                    if (fmax < dmax)
153:                        fd[fdiagoff + ++fmax + 1] = -1;
154:                    else
155:                        --fmax;
156:                    for (d = fmax; d >= fmin; d -= 2) {
157:                        int x, y, oldx, tlo = fd[fdiagoff + d - 1], thi = fd[fdiagoff
158:                                + d + 1];
159:
160:                        if (tlo >= thi)
161:                            x = tlo + 1;
162:                        else
163:                            x = thi;
164:                        oldx = x;
165:                        y = x - d;
166:                        while (x < xlim && y < ylim && xv[x] == yv[y]) {
167:                            ++x;
168:                            ++y;
169:                        }
170:                        if (x - oldx > 20)
171:                            big_snake = true;
172:                        fd[fdiagoff + d] = x;
173:                        if (odd && bmin <= d && d <= bmax
174:                                && bd[bdiagoff + d] <= fd[fdiagoff + d]) {
175:                            cost = 2 * c - 1;
176:                            return d;
177:                        }
178:                    }
179:
180:                    /* Similar extend the bottom-up search. */
181:                    if (bmin > dmin)
182:                        bd[bdiagoff + --bmin - 1] = Integer.MAX_VALUE;
183:                    else
184:                        ++bmin;
185:                    if (bmax < dmax)
186:                        bd[bdiagoff + ++bmax + 1] = Integer.MAX_VALUE;
187:                    else
188:                        --bmax;
189:                    for (d = bmax; d >= bmin; d -= 2) {
190:                        int x, y, oldx, tlo = bd[bdiagoff + d - 1], thi = bd[bdiagoff
191:                                + d + 1];
192:
193:                        if (tlo < thi)
194:                            x = tlo;
195:                        else
196:                            x = thi - 1;
197:                        oldx = x;
198:                        y = x - d;
199:                        while (x > xoff && y > yoff && xv[x - 1] == yv[y - 1]) {
200:                            --x;
201:                            --y;
202:                        }
203:                        if (oldx - x > 20)
204:                            big_snake = true;
205:                        bd[bdiagoff + d] = x;
206:                        if (!odd && fmin <= d && d <= fmax
207:                                && bd[bdiagoff + d] <= fd[fdiagoff + d]) {
208:                            cost = 2 * c;
209:                            return d;
210:                        }
211:                    }
212:
213:                    /* Heuristic: check occasionally for a diagonal that has made
214:                       lots of progress compared with the edit distance.
215:                       If we have any such, find the one that has made the most
216:                       progress and return it as if it had succeeded.
217:
218:                       With this heuristic, for files with a constant small density
219:                       of changes, the algorithm is linear in the file size.  */
220:
221:                    if (c > 200 && big_snake && heuristic) {
222:                        int best = 0;
223:                        int bestpos = -1;
224:
225:                        for (d = fmax; d >= fmin; d -= 2) {
226:                            int dd = d - fmid;
227:                            if ((fd[fdiagoff + d] - xoff) * 2 - dd > 12 * (c + (dd > 0 ? dd
228:                                    : -dd))) {
229:                                if (fd[fdiagoff + d] * 2 - dd > best
230:                                        && fd[fdiagoff + d] - xoff > 20
231:                                        && fd[fdiagoff + d] - d - yoff > 20) {
232:                                    int k;
233:                                    int x = fd[fdiagoff + d];
234:
235:                                    /* We have a good enough best diagonal;
236:                                       now insist that it end with a significant snake.  */
237:                                    for (k = 1; k <= 20; k++)
238:                                        if (xvec[x - k] != yvec[x - d - k])
239:                                            break;
240:
241:                                    if (k == 21) {
242:                                        best = fd[fdiagoff + d] * 2 - dd;
243:                                        bestpos = d;
244:                                    }
245:                                }
246:                            }
247:                        }
248:                        if (best > 0) {
249:                            cost = 2 * c - 1;
250:                            return bestpos;
251:                        }
252:
253:                        best = 0;
254:                        for (d = bmax; d >= bmin; d -= 2) {
255:                            int dd = d - bmid;
256:                            if ((xlim - bd[bdiagoff + d]) * 2 + dd > 12 * (c + (dd > 0 ? dd
257:                                    : -dd))) {
258:                                if ((xlim - bd[bdiagoff + d]) * 2 + dd > best
259:                                        && xlim - bd[bdiagoff + d] > 20
260:                                        && ylim - (bd[bdiagoff + d] - d) > 20) {
261:                                    /* We have a good enough best diagonal;
262:                                       now insist that it end with a significant snake.  */
263:                                    int k;
264:                                    int x = bd[bdiagoff + d];
265:
266:                                    for (k = 0; k < 20; k++)
267:                                        if (xvec[x + k] != yvec[x - d + k])
268:                                            break;
269:                                    if (k == 20) {
270:                                        best = (xlim - bd[bdiagoff + d]) * 2
271:                                                + dd;
272:                                        bestpos = d;
273:                                    }
274:                                }
275:                            }
276:                        }
277:                        if (best > 0) {
278:                            cost = 2 * c - 1;
279:                            return bestpos;
280:                        }
281:                    }
282:                }
283:            }
284:
285:            /** Compare in detail contiguous subsequences of the two files
286:               which are known, as a whole, to match each other.
287:
288:               The results are recorded in the vectors filevec[N].changed_flag, by
289:               storing a 1 in the element for each line that is an insertion or deletion.
290:
291:               The subsequence of file 0 is [XOFF, XLIM) and likewise for file 1.
292:
293:               Note that XLIM, YLIM are exclusive bounds.
294:               All line numbers are origin-0 and discarded lines are not counted.  */
295:
296:            private void compareseq(int xoff, int xlim, int yoff, int ylim) {
297:                /* Slide down the bottom initial diagonal. */
298:                while (xoff < xlim && yoff < ylim && xvec[xoff] == yvec[yoff]) {
299:                    ++xoff;
300:                    ++yoff;
301:                }
302:                /* Slide up the top initial diagonal. */
303:                while (xlim > xoff && ylim > yoff
304:                        && xvec[xlim - 1] == yvec[ylim - 1]) {
305:                    --xlim;
306:                    --ylim;
307:                }
308:
309:                /* Handle simple cases. */
310:                if (xoff == xlim)
311:                    while (yoff < ylim)
312:                        filevec[1].changed_flag[1 + filevec[1].realindexes[yoff++]] = true;
313:                else if (yoff == ylim)
314:                    while (xoff < xlim)
315:                        filevec[0].changed_flag[1 + filevec[0].realindexes[xoff++]] = true;
316:                else {
317:                    /* Find a point of correspondence in the middle of the files.  */
318:
319:                    int d = diag(xoff, xlim, yoff, ylim);
320:                    int c = cost;
321:                    int f = fdiag[fdiagoff + d];
322:                    int b = bdiag[bdiagoff + d];
323:
324:                    if (c == 1) {
325:                        /* This should be impossible, because it implies that
326:                           one of the two subsequences is empty,
327:                           and that case was handled above without calling `diag'.
328:                           Let's verify that this is true.  */
329:                        throw new IllegalArgumentException("Empty subsequence");
330:                    } else {
331:                        /* Use that point to split this problem into two subproblems.  */
332:                        compareseq(xoff, b, yoff, b - d);
333:                        /* This used to use f instead of b,
334:                           but that is incorrect!
335:                           It is not necessarily the case that diagonal d
336:                           has a snake from b to f.  */
337:                        compareseq(b, xlim, b - d, ylim);
338:                    }
339:                }
340:            }
341:
342:            /** Discard lines from one file that have no matches in the other file.
343:             */
344:
345:            private void discard_confusing_lines() {
346:                filevec[0].discard_confusing_lines(filevec[1]);
347:                filevec[1].discard_confusing_lines(filevec[0]);
348:            }
349:
350:            private boolean inhibit = false;
351:
352:            /** Adjust inserts/deletes of blank lines to join changes
353:               as much as possible.
354:             */
355:
356:            private void shift_boundaries() {
357:                if (inhibit)
358:                    return;
359:                filevec[0].shift_boundaries(filevec[1]);
360:                filevec[1].shift_boundaries(filevec[0]);
361:            }
362:
363:            /** Scan the tables of which lines are inserted and deleted,
364:               producing an edit script in reverse order.  */
365:
366:            private change build_reverse_script() {
367:                change script = null;
368:                final boolean[] changed0 = filevec[0].changed_flag;
369:                final boolean[] changed1 = filevec[1].changed_flag;
370:                final int len0 = filevec[0].buffered_lines;
371:                final int len1 = filevec[1].buffered_lines;
372:
373:                /* Note that changedN[len0] does exist, and contains 0.  */
374:
375:                int i0 = 0, i1 = 0;
376:
377:                while (i0 < len0 || i1 < len1) {
378:                    if (changed0[1 + i0] || changed1[1 + i1]) {
379:                        int line0 = i0, line1 = i1;
380:
381:                        /* Find # lines changed here in each file.  */
382:                        while (changed0[1 + i0])
383:                            ++i0;
384:                        while (changed1[1 + i1])
385:                            ++i1;
386:
387:                        /* Record this change.  */
388:                        script = new change(line0, line1, i0 - line0, i1
389:                                - line1, script);
390:                    }
391:
392:                    /* We have reached lines in the two files that match each other.  */
393:                    i0++;
394:                    i1++;
395:                }
396:
397:                return script;
398:            }
399:
400:            mapping map;
401:
402:            /** Scan the tables of which lines are inserted and deleted,
403:               producing an edit script in forward order.  */
404:            // also builds a mapping (line correspondence)
405:            private change build_script() {
406:                change script = null;
407:                map = null;
408:                final boolean[] changed0 = filevec[0].changed_flag;
409:                final boolean[] changed1 = filevec[1].changed_flag;
410:                final int len0 = filevec[0].buffered_lines;
411:                final int len1 = filevec[1].buffered_lines;
412:                int i0 = len0, i1 = len1;
413:
414:                /* Note that changedN[-1] does exist, and contains 0.  */
415:
416:                while (i0 >= 0 || i1 >= 0) {
417:                    if (changed0[i0] || changed1[i1]) {
418:                        int line0 = i0, line1 = i1;
419:
420:                        /* Find # lines changed here in each file.  */
421:                        while (changed0[i0])
422:                            --i0;
423:                        while (changed1[i1])
424:                            --i1;
425:
426:                        /* Record this change.  */
427:                        script = new change(i0, i1, line0 - i0, line1 - i1,
428:                                script);
429:                    }
430:
431:                    /* We have reached lines in the two files that match each other.  */
432:                    i0--;
433:                    i1--;
434:                    if (i0 >= 0)
435:                        map = new mapping(i0, i1, map);
436:                }
437:
438:                return script;
439:            }
440:
441:            public mapping getMapping() {
442:                return map;
443:            }
444:
445:            public change diff_2() {
446:                return diff_2(false);
447:            }
448:
449:            /* Report the differences of two files.  */
450:            public change diff_2(final boolean reverse) {
451:
452:                /* Some lines are obviously insertions or deletions
453:                   because they don't match anything.  Detect them now,
454:                   and avoid even thinking about them in the main comparison algorithm.  */
455:
456:                discard_confusing_lines();
457:
458:                /* Now do the main comparison algorithm, considering just the
459:                   undiscarded lines.  */
460:
461:                xvec = filevec[0].undiscarded;
462:                yvec = filevec[1].undiscarded;
463:
464:                int diags = filevec[0].nondiscarded_lines
465:                        + filevec[1].nondiscarded_lines + 3;
466:                fdiag = new int[diags];
467:                fdiagoff = filevec[1].nondiscarded_lines + 1;
468:                bdiag = new int[diags];
469:                bdiagoff = filevec[1].nondiscarded_lines + 1;
470:
471:                compareseq(0, filevec[0].nondiscarded_lines, 0,
472:                        filevec[1].nondiscarded_lines);
473:                fdiag = null;
474:                bdiag = null;
475:
476:                /* Modify the results slightly to make them prettier
477:                   in cases where that can validly be done.  */
478:
479:                shift_boundaries();
480:
481:                /* Get the results of comparison in the form of a chain
482:                   of `struct change's -- an edit script.  */
483:
484:                if (reverse)
485:                    return build_reverse_script();
486:                else
487:                    return build_script();
488:            }
489:
490:            /** The result of comparison is an "edit script": a chain of change objects.
491:               Each change represents one place where some lines are deleted
492:               and some are inserted.
493:               
494:               LINE0 and LINE1 are the first affected lines in the two files (origin 0).
495:               DELETED is the number of lines deleted here from file 0.
496:               INSERTED is the number of lines inserted here in file 1.
497:
498:               If DELETED is 0 then LINE0 is the number of the line before
499:               which the insertion was done; vice versa for INSERTED and LINE1.  */
500:
501:            public static class change {
502:                /** Previous or next edit command. */
503:                public change link;
504:                /** # lines of file 1 changed here.  */
505:                public int inserted;
506:                /** # lines of file 0 changed here.  */
507:                public int deleted;
508:                /** Line number of 1st deleted line.  */
509:                public final int line0;
510:                /** Line number of 1st inserted line.  */
511:                public final int line1;
512:
513:                /** Cons an additional entry onto the front of an edit script OLD.
514:                   LINE0 and LINE1 are the first affected lines in the two files (origin 0).
515:                   DELETED is the number of lines deleted here from file 0.
516:                   INSERTED is the number of lines inserted here in file 1.
517:
518:                   If DELETED is 0 then LINE0 is the number of the line before
519:                   which the insertion was done; vice versa for INSERTED and LINE1.  */
520:                change(int line0, int line1, int deleted, int inserted,
521:                        change old) {
522:                    this .line0 = line0;
523:                    this .line1 = line1;
524:                    this .inserted = inserted;
525:                    this .deleted = deleted;
526:                    this .link = old;
527:                    //System.err.println(line0+","+line1+","+inserted+","+deleted);
528:                }
529:
530:                public String toString() {
531:                    String s = "";
532:                    if (deleted > 0)
533:                        s += "deleted " + deleted + " at " + line0 + "\n";
534:                    if (inserted > 0)
535:                        s += "inserted " + inserted + " at " + line1 + "\n";
536:                    if (link != null)
537:                        s += link;
538:                    return s;
539:                }
540:
541:                public int diminishingPenalty() {
542:                    int p = 0;
543:                    for (int i = 0; i < deleted; i++)
544:                        p += 100 / (line0 + i + 1);
545:                    for (int i = 0; i < inserted; i++)
546:                        p += 75 / (line1 + i + 1);
547:                    p = -p;
548:                    if (link == null)
549:                        return p;
550:                    else
551:                        return p + link.diminishingPenalty();
552:                }
553:
554:                public int uniformPenalty() {
555:                    int p = 10 * deleted + 5 * inserted;
556:                    p = -p;
557:                    if (link == null)
558:                        return p;
559:                    else
560:                        return p + link.uniformPenalty();
561:                }
562:
563:            }
564:
565:            public static class mapping {
566:                /** Previous or next edit command. */
567:                public mapping link;
568:                public int from;
569:                public int to;
570:
571:                mapping(int from, int to, mapping old) {
572:                    this .from = from;
573:                    this .to = to;
574:                    this .link = old;
575:                }
576:
577:                public int from() {
578:                    return from;
579:                }
580:
581:                public int to() {
582:                    return to;
583:                }
584:
585:                public String toString() {
586:                    String s = "";
587:                    s += "from " + from + " to " + to + "\n";
588:                    if (link != null)
589:                        s += link;
590:                    return s;
591:                }
592:
593:                public mapping next() {
594:                    return link;
595:                }
596:
597:            }
598:
599:            /** Data on one input file being compared.  
600:             */
601:
602:            class file_data {
603:
604:                /** Allocate changed array for the results of comparison.  */
605:                void clear() {
606:                    /* Allocate a flag for each line of each file, saying whether that line
607:                       is an insertion or deletion.
608:                       Allocate an extra element, always zero, at each end of each vector.
609:                     */
610:                    changed_flag = new boolean[buffered_lines + 2];
611:                }
612:
613:                /** Return equiv_count[I] as the number of lines in this file
614:                   that fall in equivalence class I.
615:                     @return the array of equivalence class counts.
616:                 */
617:                int[] equivCount() {
618:                    int[] equiv_count = new int[equiv_max];
619:                    for (int i = 0; i < buffered_lines; ++i)
620:                        ++equiv_count[equivs[i]];
621:                    return equiv_count;
622:                }
623:
624:                /** Discard lines that have no matches in another file.
625:
626:                   A line which is discarded will not be considered by the actual
627:                   comparison algorithm; it will be as if that line were not in the file.
628:                   The file's `realindexes' table maps virtual line numbers
629:                   (which don't count the discarded lines) into real line numbers;
630:                   this is how the actual comparison algorithm produces results
631:                   that are comprehensible when the discarded lines are counted.
632:                <p>
633:                   When we discard a line, we also mark it as a deletion or insertion
634:                   so that it will be printed in the output.  
635:                  @param f the other file   
636:                 */
637:                void discard_confusing_lines(file_data f) {
638:                    clear();
639:                    /* Set up table of which lines are going to be discarded. */
640:                    final byte[] discarded = discardable(f.equivCount());
641:
642:                    /* Don't really discard the provisional lines except when they occur
643:                       in a run of discardables, with nonprovisionals at the beginning
644:                       and end.  */
645:                    filterDiscards(discarded);
646:
647:                    /* Actually discard the lines. */
648:                    discard(discarded);
649:                }
650:
651:                /** Mark to be discarded each line that matches no line of another file.
652:                   If a line matches many lines, mark it as provisionally discardable.  
653:                   @see equivCount()
654:                   @param counts The count of each equivalence number for the other file.
655:                   @return 0=nondiscardable, 1=discardable or 2=provisionally discardable
656:                           for each line
657:                 */
658:
659:                private byte[] discardable(final int[] counts) {
660:                    final int end = buffered_lines;
661:                    final byte[] discards = new byte[end];
662:                    final int[] equivals = this .equivs;
663:                    int many = 5;
664:                    int tem = end / 64;
665:
666:                    /* Multiply MANY by approximate square root of number of lines.
667:                       That is the threshold for provisionally discardable lines.  */
668:                    while ((tem = tem >> 2) > 0)
669:                        many *= 2;
670:
671:                    for (int i = 0; i < end; i++) {
672:                        int nmatch;
673:                        if (equivals[i] == 0)
674:                            continue;
675:                        nmatch = counts[equivals[i]];
676:                        if (nmatch == 0)
677:                            discards[i] = 1;
678:                        else if (nmatch > many)
679:                            discards[i] = 2;
680:                    }
681:                    return discards;
682:                }
683:
684:                /** Don't really discard the provisional lines except when they occur
685:                   in a run of discardables, with nonprovisionals at the beginning
686:                   and end.  */
687:
688:                private void filterDiscards(final byte[] discards) {
689:                    final int end = buffered_lines;
690:
691:                    for (int i = 0; i < end; i++) {
692:                        /* Cancel provisional discards not in middle of run of discards.  */
693:                        if (discards[i] == 2)
694:                            discards[i] = 0;
695:                        else if (discards[i] != 0) {
696:                            /* We have found a nonprovisional discard.  */
697:                            int j;
698:                            int length;
699:                            int provisional = 0;
700:
701:                            /* Find end of this run of discardable lines.
702:                               Count how many are provisionally discardable.  */
703:                            for (j = i; j < end; j++) {
704:                                if (discards[j] == 0)
705:                                    break;
706:                                if (discards[j] == 2)
707:                                    ++provisional;
708:                            }
709:
710:                            /* Cancel provisional discards at end, and shrink the run.  */
711:                            while (j > i && discards[j - 1] == 2) {
712:                                discards[--j] = 0;
713:                                --provisional;
714:                            }
715:
716:                            /* Now we have the length of a run of discardable lines
717:                               whose first and last are not provisional.  */
718:                            length = j - i;
719:
720:                            /* If 1/4 of the lines in the run are provisional,
721:                               cancel discarding of all provisional lines in the run.  */
722:                            if (provisional * 4 > length) {
723:                                while (j > i)
724:                                    if (discards[--j] == 2)
725:                                        discards[j] = 0;
726:                            } else {
727:                                int consec;
728:                                int minimum = 1;
729:                                int tem = length / 4;
730:
731:                                /* MINIMUM is approximate square root of LENGTH/4.
732:                                   A subrun of two or more provisionals can stand
733:                                   when LENGTH is at least 16.
734:                                   A subrun of 4 or more can stand when LENGTH >= 64.  */
735:                                while ((tem = tem >> 2) > 0)
736:                                    minimum *= 2;
737:                                minimum++;
738:
739:                                /* Cancel any subrun of MINIMUM or more provisionals
740:                                   within the larger run.  */
741:                                for (j = 0, consec = 0; j < length; j++)
742:                                    if (discards[i + j] != 2)
743:                                        consec = 0;
744:                                    else if (minimum == ++consec)
745:                                        /* Back up to start of subrun, to cancel it all.  */
746:                                        j -= consec;
747:                                    else if (minimum < consec)
748:                                        discards[i + j] = 0;
749:
750:                                /* Scan from beginning of run
751:                                   until we find 3 or more nonprovisionals in a row
752:                                   or until the first nonprovisional at least 8 lines in.
753:                                   Until that point, cancel any provisionals.  */
754:                                for (j = 0, consec = 0; j < length; j++) {
755:                                    if (j >= 8 && discards[i + j] == 1)
756:                                        break;
757:                                    if (discards[i + j] == 2) {
758:                                        consec = 0;
759:                                        discards[i + j] = 0;
760:                                    } else if (discards[i + j] == 0)
761:                                        consec = 0;
762:                                    else
763:                                        consec++;
764:                                    if (consec == 3)
765:                                        break;
766:                                }
767:
768:                                /* I advances to the last line of the run.  */
769:                                i += length - 1;
770:
771:                                /* Same thing, from end.  */
772:                                for (j = 0, consec = 0; j < length; j++) {
773:                                    if (j >= 8 && discards[i - j] == 1)
774:                                        break;
775:                                    if (discards[i - j] == 2) {
776:                                        consec = 0;
777:                                        discards[i - j] = 0;
778:                                    } else if (discards[i - j] == 0)
779:                                        consec = 0;
780:                                    else
781:                                        consec++;
782:                                    if (consec == 3)
783:                                        break;
784:                                }
785:                            }
786:                        }
787:                    }
788:                }
789:
790:                /** Actually discard the lines.
791:                  @param discards flags lines to be discarded
792:                 */
793:                private void discard(final byte[] discards) {
794:                    final int end = buffered_lines;
795:                    int j = 0;
796:                    for (int i = 0; i < end; ++i)
797:                        if (no_discards || discards[i] == 0) {
798:                            undiscarded[j] = equivs[i];
799:                            realindexes[j++] = i;
800:                        } else
801:                            changed_flag[1 + i] = true;
802:                    nondiscarded_lines = j;
803:                }
804:
805:                file_data(Vector data, Hashtable h) {
806:                    buffered_lines = data.size();
807:
808:                    equivs = new int[buffered_lines];
809:                    undiscarded = new int[buffered_lines];
810:                    realindexes = new int[buffered_lines];
811:
812:                    for (int i = 0; i < data.size(); ++i) {
813:                        Integer ir = (Integer) h.get(data.elementAt(i));
814:                        if (ir == null)
815:                            h.put(data.elementAt(i), new Integer(
816:                                    equivs[i] = equiv_max++));
817:                        else
818:                            equivs[i] = ir.intValue();
819:                    }
820:                }
821:
822:                file_data(PosInTerm data, Hashtable h) {
823:                    buffered_lines = data.depth();
824:
825:                    equivs = new int[buffered_lines];
826:                    undiscarded = new int[buffered_lines];
827:                    realindexes = new int[buffered_lines];
828:
829:                    IntIterator it = data.reverseIterator();
830:
831:                    for (int i = buffered_lines - 1; i >= 0; i--) {
832:                        equivs[i] = it.next();
833:                        if (equivs[i] > equiv_max)
834:                            equiv_max = equivs[i];
835:                    }
836:                    equiv_max++; // will be used as array length
837:                }
838:
839:                /** Adjust inserts/deletes of blank lines to join changes
840:                   as much as possible.
841:
842:                   We do something when a run of changed lines include a blank
843:                   line at one end and have an excluded blank line at the other.
844:                   We are free to choose which blank line is included.
845:                   `compareseq' always chooses the one at the beginning,
846:                   but usually it is cleaner to consider the following blank line
847:                   to be the "change".  The only exception is if the preceding blank line
848:                   would join this change to other changes.  
849:                  @param f the file being compared against
850:                 */
851:
852:                void shift_boundaries(file_data f) {
853:                    final boolean[] changed = changed_flag;
854:                    final boolean[] other_changed = f.changed_flag;
855:                    int i = 0;
856:                    int j = 0;
857:                    int i_end = buffered_lines;
858:                    int preceding = -1;
859:                    int other_preceding = -1;
860:
861:                    for (;;) {
862:                        int start, end, other_start;
863:
864:                        /* Scan forwards to find beginning of another run of changes.
865:                           Also keep track of the corresponding point in the other file.  */
866:
867:                        while (i < i_end && !changed[1 + i]) {
868:                            while (other_changed[1 + j++])
869:                                /* Non-corresponding lines in the other file
870:                                   will count as the preceding batch of changes.  */
871:                                other_preceding = j;
872:                            i++;
873:                        }
874:
875:                        if (i == i_end)
876:                            break;
877:
878:                        start = i;
879:                        other_start = j;
880:
881:                        for (;;) {
882:                            /* Now find the end of this run of changes.  */
883:
884:                            while (i < i_end && changed[1 + i])
885:                                i++;
886:                            end = i;
887:
888:                            /* If the first changed line matches the following unchanged one,
889:                               and this run does not follow right after a previous run,
890:                               and there are no lines deleted from the other file here,
891:                               then classify the first changed line as unchanged
892:                               and the following line as changed in its place.  */
893:
894:                            /* You might ask, how could this run follow right after another?
895:                               Only because the previous run was shifted here.  */
896:
897:                            if (end != i_end
898:                                    && equivs[start] == equivs[end]
899:                                    && !other_changed[1 + j]
900:                                    && end != i_end
901:                                    && !((preceding >= 0 && start == preceding) || (other_preceding >= 0 && other_start == other_preceding))) {
902:                                changed[1 + end++] = true;
903:                                changed[1 + start++] = false;
904:                                ++i;
905:                                /* Since one line-that-matches is now before this run
906:                                   instead of after, we must advance in the other file
907:                                   to keep in synch.  */
908:                                ++j;
909:                            } else
910:                                break;
911:                        }
912:
913:                        preceding = i;
914:                        other_preceding = j;
915:                    }
916:                }
917:
918:                /** Number of elements (lines) in this file. */
919:                final int buffered_lines;
920:
921:                /** Vector, indexed by line number, containing an equivalence code for
922:                   each line.  It is this vector that is actually compared with that
923:                   of another file to generate differences. */
924:                private final int[] equivs;
925:
926:                /** Vector, like the previous one except that
927:                   the elements for discarded lines have been squeezed out.  */
928:                final int[] undiscarded;
929:
930:                /** Vector mapping virtual line numbers (not counting discarded lines)
931:                   to real ones (counting those lines).  Both are origin-0.  */
932:                final int[] realindexes;
933:
934:                /** Total number of nondiscarded lines. */
935:                int nondiscarded_lines;
936:
937:                /** Array, indexed by real origin-1 line number,
938:                   containing true for a line that is an insertion or a deletion.
939:                   The results of comparison are stored here.  */
940:                boolean[] changed_flag;
941:
942:            }
943:
944:            public static void main(String argv[]) {
945:                PosInTerm p1 = PosInTerm.TOP_LEVEL.down(1).down(2).down(3)
946:                        .down(4);
947:                PosInTerm p2 = PosInTerm.TOP_LEVEL.down(0).down(1).down(3)
948:                        .down(5);
949:                System.out.println(new DiffMyers(p1, p2).diff_2());
950:            }
951:
952:        }
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